Package: bmetapred 0.1.0
bmetapred: Bayesian Meta-Prediction in the Presence of Prediction Error
Fits pseudo-Bayesian Model Averaging (pBMA) and Bayesian Stacking ensembles of linear meta-models while explicitly accounting for the prediction errors of the individual models, building on the Bayesian Stacking of predictive distributions framework of Yao et al. (2018) <doi:10.1214/17-BA1091>. When native uncertainty estimates are unavailable, it provides tools to estimate heteroscedastic errors via Local Polynomial Regression (LOESS). The meta-model space is explored using exhaustive search, a Markov Chain Monte Carlo Model Composition (MC3) algorithm following Madigan and Raftery (1994) <doi:10.1080/01621459.1994.10476894> when pBMA is selected, or a tabu-guided heuristic search with parallel tempering when bayesian stacking is selected, all powered by 'brms' (Bürkner, 2017 <doi:10.18637/jss.v080.i01>).
Authors:
bmetapred_0.1.0.tar.gz
bmetapred_0.1.0.zip(r-4.7-any)bmetapred_0.1.0.zip(r-4.6-any)bmetapred_0.1.0.zip(r-4.5-any)
bmetapred_0.1.0.tgz(r-4.6-any)bmetapred_0.1.0.tgz(r-4.5-any)
bmetapred_0.1.0.tar.gz(r-4.7-any)bmetapred_0.1.0.tar.gz(r-4.6-any)
bmetapred_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
bmetapred/json (API)
| # Install 'bmetapred' in R: |
| install.packages('bmetapred', repos = c('https://jorgepiquerasmarques.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jorgepiquerasmarques/bmetapred/issues
bayesian-methodsbayesian-model-averagingmarkov-chain-monte-carlometa-modelmeta-predictorprediction-errorstacking-ensemble
Last updated from:05e6001147. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 132 | ||
| source / vignettes | OK | 187 | ||
| linux-release | OK | 174 | ||
| macos-release | OK | 167 | ||
| macos-oldrel | OK | 205 | ||
| windows-devel | OK | 98 | ||
| windows-release | OK | 78 | ||
| windows-oldrel | OK | 85 | ||
| wasm-release | OK | 145 |
Exports:fit_bmetapredfit_LOESSget_pip_bmetapred
Dependencies:abindbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscpp11descdigestdistributionaldplyrfarverfuturefuture.applygenericsggdistggplot2ggridgesglobalsgluegridExtragtableinlineisobandlabelinglatticelifecyclelistenvloomagrittrMatrixmatrixStatsmgcvmvtnormnleqslvnlmenumDerivotelparallellypillarpkgbuildpkgconfigplyrposteriorprocessxpspurrrquadprogQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelreshape2rlangrstanrstantoolsS7scalesStanHeadersstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fit an Ensemble of bayesian linear meta-models with prediction errors | fit_bmetapred |
| Fit LOESS Error Models for Ensemble Predictors | fit_LOESS |
| Extract Posterior Inclusion Probabilities (PIP) | get_pip_bmetapred |
| Predict Standard Deviations using Fitted LOESS Error Models | predict.bmetapred_loess |
| Predict Method for Ensemble Models | predict.bmetapred_model |
| Summarize a bmetapred Ensemble Model | summary.bmetapred_model |
